BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB006E04LP1|AL425544
(1036 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig949 1691 0.0
>3x_Contig949
Length = 3686
Score = 1691 bits (850), Expect = 0.0
Identities = 948/970 (97%), Gaps = 10/970 (1%)
Strand = Plus / Plus
Query: 25 ttctattcagatctcatcctatctcttttttattgataaaagcgaagttttgaatgctga 84
||||||||||||||||||| | ||| | | |||||||||||||||||||||||||||||
Sbjct: 1049 ttctattcagatctcatccaa-ctcaatgtcattgataaaagcgaagttttgaatgctga 1107
Query: 85 ttgwtctcaaggtgattwaaatgagacgcttgtcaataaatgcatacacatcatgttgat 144
| | |||||||||||| ||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 1108 t-gatctcaaggtgataaaaatgagacgcttgtaaataaatgcatacacatcatgttgat 1166
Query: 145 ataaataatatttaggtttttccagtacaaaaaaatgactatatgaacaatacactggag 204
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1167 ataaataatatttaggtttttccagtacaaaaaaatgactatatgaacaatacactggag 1226
Query: 205 aatgtggggaaaatagttggtgttttacataataaatcatgaataagtcgtcgtaattca 264
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1227 aatgtggggaaaatagttggtgttttacataataaatcatgaataagtcgtcgtaattca 1286
Query: 265 gaatcggcttgaaatcaaagtatgagtataatgtttgtttagaatatcatgactggaatt 324
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1287 gaatcggcttgaaatcaaagtatgagtataatgtttgtttagaatatcatgactggaatt 1346
Query: 325 ggtatcagcttgatagtataaatgcattatacttcacatatcttgcaaatcagaaagccc 384
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1347 ggtatcagcttgatagtataaatgcattatacttcacatatcttgcaaatcagaaagccc 1406
Query: 385 gattttttttttagatatccttttgttgttttcttttgtcttgtattgttgattagccta 444
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1407 gattttttttttagatatccttttgttgttttcttttgtcttgtattgttgattagccta 1466
Query: 445 cttttcttctttttttcttcaagtccgtttgccaatatctggaaacagtcatagagctga 504
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1467 cttttcttctttttttcttcaagtccgtttgccaatatctggaaacagtcatagagctga 1526
Query: 505 ggaatacgcatatatgtsaccattgttagataaagaatacttctctctccctcacatata 564
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1527 ggaatacgcatatatgtaaccattgttagataaagaatacttctctctccctcacatata 1586
Query: 565 ttgcagaaggtgaatggatacatttgcatgagtgcagagcgggagtttctgtgatgccaa 624
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1587 ttgcagaaggtgaatggatacatttgcatgagtgcagagcgggagtttctgtgatgccaa 1646
Query: 625 aaaaaaaagaagaacaatatctatmaagatggagaactctttaaatcaaatttaagccaa 684
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 1647 aaaaaaaagaagaacaatatctataaagatggagaactctttaaatcaaatttaagccaa 1706
Query: 685 aagcatctttcttggatcttcaatcaattccttgacagttctcaagaaagtaacagcctc 744
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1707 aagcatctttcttggatcttcaatcaattccttgacagttctcaagaaagtaacagcctc 1766
Query: 745 tctaccatccaacaacctatggtcataagtcaaagccaagtacatcattggtctagagac 804
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1767 tctaccatccaacaacctatggtcataagtcaaagccaagtacatcattggtctagagac 1826
Query: 805 gatttgaccattaacagtgacaggtctttccttaacaccgtgcaaacctaaaacagccgt 864
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1827 gatttgaccattaacagtgacaggtctttccttaacaccgtgcaaacctaaaacagccgt 1886
Query: 865 ttgtggcatgttaatgattggggta-cgtacaatgaaccg-agaca-caccgttagagat 921
||||||||||||||||||||||||| |||||||||||||| ||||| |||||||||||||
Sbjct: 1887 ttgtggcatgttaatgattggggtaccgtacaatgaaccgaagacaccaccgttagagat 1946
Query: 922 ggtgaaagta-camcagccatatcttcc-aagtcaactta-catctctgg-cttctta-c 976
|||||||||| || |||||||||||||| ||||||||||| ||||||||| ||||||| |
Sbjct: 1947 ggtgaaagtaccaccagccatatcttccaaagtcaacttaccatctctggccttcttacc 2006
Query: 977 caatctgaca 986
||||||||||
Sbjct: 2007 caatctgaca 2016
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 11,949
Number of Sequences: 1807
Number of extensions: 11949
Number of successful extensions: 108
Number of sequences better than 1.0e-20: 1
length of query: 1036
length of database: 10,358,551
effective HSP length: 16
effective length of query: 1020
effective length of database: 10,329,639
effective search space: 10536231780
effective search space used: 10536231780
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.4 bits)
S2: 50 (100.0 bits)